Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Smarca1Q6PGB8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smarca1Q6PGB8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca1Q6PGB8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca1Q6PGB8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Gm11643-201ENSMUST00000119578 864 ntBASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca1Q6PGB8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarca1Q6PGB8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarca1Q6PGB8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca1Q6PGB8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Gm21814-202ENSMUST00000203277 873 ntBASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smarca1Q6PGB8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Gm29791-202ENSMUST00000207888 369 ntBASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca1Q6PGB8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms