Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup98Q6PFD9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup98Q6PFD9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nup98Q6PFD9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.58■□□□□ 0.88
Nup98Q6PFD9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nup98Q6PFD9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup98Q6PFD9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Gm26039-201ENSMUST00000158152 144 ntBASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Nup98Q6PFD9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup98Q6PFD9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Gm27357-201ENSMUST00000183754 135 ntBASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup98Q6PFD9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Nup98Q6PFD9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup98Q6PFD9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup98Q6PFD9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup98Q6PFD9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nup98Q6PFD9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms