Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.6■□□□□ 0.57
CtifQ6PEE2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.6■□□□□ 0.57
CtifQ6PEE2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CtifQ6PEE2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CtifQ6PEE2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CtifQ6PEE2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.57■□□□□ 0.56
CtifQ6PEE2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CtifQ6PEE2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.56■□□□□ 0.56
CtifQ6PEE2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CtifQ6PEE2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Gm21956-201ENSMUST00000179946 522 ntBASIC18.55■□□□□ 0.56
CtifQ6PEE2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CtifQ6PEE2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms