Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Smarcc2Q6PDG5 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Gm42545-201ENSMUST00000202755 922 ntBASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.31■□□□□ 0.84
Smarcc2Q6PDG5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Gm43183-201ENSMUST00000200632 547 ntBASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc2Q6PDG5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc2Q6PDG5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Mir1199-201ENSMUST00000117015 119 ntBASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcc2Q6PDG5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc2Q6PDG5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc2Q6PDG5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms