Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Gm18958-201ENSMUST00000174258 762 ntBASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Idnk-204ENSMUST00000226010 1898 ntBASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slf2Q6P9P0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slf2Q6P9P0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slf2Q6P9P0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.52■■□□□ 1.04
Slf2Q6P9P0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Gm6623-201ENSMUST00000173570 544 ntBASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slf2Q6P9P0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.52■■□□□ 1.03
Slf2Q6P9P0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Gm37722-201ENSMUST00000193757 208 ntBASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Gm7461-201ENSMUST00000058918 827 ntBASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.51■■□□□ 1.03
Slf2Q6P9P0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Mir770-201ENSMUST00000103252 94 ntBASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slf2Q6P9P0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Slf2Q6P9P0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Slf2Q6P9P0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms