Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.51■□□□□ 0.71
Abcf1Q6P542 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Rab3c-203ENSMUST00000224180 967 ntBASIC19.5■□□□□ 0.71
Abcf1Q6P542 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abcf1Q6P542 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Abcf1Q6P542 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.49■□□□□ 0.71
Abcf1Q6P542 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.49■□□□□ 0.71
Abcf1Q6P542 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abcf1Q6P542 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.48■□□□□ 0.71
Abcf1Q6P542 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.48■□□□□ 0.71
Abcf1Q6P542 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.48■□□□□ 0.71
Abcf1Q6P542 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.47■□□□□ 0.71
Abcf1Q6P542 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Gm26524-201ENSMUST00000192339 390 ntBASIC19.47■□□□□ 0.71
Abcf1Q6P542 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf1Q6P542 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf1Q6P542 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
Abcf1Q6P542 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Haglr-201ENSMUST00000100000 2085 ntBASIC19.45■□□□□ 0.7
Abcf1Q6P542 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms