Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Gm4974-201ENSMUST00000209974 875 ntBASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtl3Q6P1Y1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtl3Q6P1Y1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rtl3Q6P1Y1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtl3Q6P1Y1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18■□□□□ 0.47
Rtl3Q6P1Y1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Gm6433-201ENSMUST00000118634 875 ntBASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Gm9694-201ENSMUST00000193347 1189 ntBASIC18■□□□□ 0.47
Rtl3Q6P1Y1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Gm5417-201ENSMUST00000079706 384 ntBASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtl3Q6P1Y1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rtl3Q6P1Y1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Gm43799-201ENSMUST00000201845 579 ntBASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Timm23-208ENSMUST00000226683 750 ntBASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl3Q6P1Y1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms