Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm4Q6IRU2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm4Q6IRU2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm4Q6IRU2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm4Q6IRU2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms