Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Gm43438-201ENSMUST00000198133 379 ntBASIC17.83■□□□□ 0.44
Cep290Q6A078 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cep290Q6A078 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cep290Q6A078 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cep290Q6A078 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.82■□□□□ 0.44
Cep290Q6A078 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.82■□□□□ 0.44
Cep290Q6A078 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.82■□□□□ 0.44
Cep290Q6A078 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.82■□□□□ 0.44
Cep290Q6A078 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.82■□□□□ 0.44
Cep290Q6A078 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cep290Q6A078 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cep290Q6A078 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cep290Q6A078 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cep290Q6A078 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.81■□□□□ 0.44
Cep290Q6A078 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.81■□□□□ 0.44
Cep290Q6A078 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cep290Q6A078 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cep290Q6A078 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.81■□□□□ 0.44
Cep290Q6A078 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Gm11779-201ENSMUST00000118541 368 ntBASIC17.8■□□□□ 0.44
Cep290Q6A078 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.8■□□□□ 0.44
Cep290Q6A078 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cep290Q6A078 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.8■□□□□ 0.44
Cep290Q6A078 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
Cep290Q6A078 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.8■□□□□ 0.44
Cep290Q6A078 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cep290Q6A078 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Gm7862-201ENSMUST00000121461 292 ntBASIC17.79■□□□□ 0.44
Cep290Q6A078 Gm14822-201ENSMUST00000122247 291 ntBASIC17.79■□□□□ 0.44
Cep290Q6A078 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.79■□□□□ 0.44
Cep290Q6A078 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.79■□□□□ 0.44
Cep290Q6A078 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cep290Q6A078 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cep290Q6A078 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cep290Q6A078 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.78■□□□□ 0.44
Cep290Q6A078 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.78■□□□□ 0.44
Cep290Q6A078 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.78■□□□□ 0.44
Cep290Q6A078 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cep290Q6A078 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cep290Q6A078 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.77■□□□□ 0.44
Cep290Q6A078 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.77■□□□□ 0.44
Cep290Q6A078 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.77■□□□□ 0.44
Cep290Q6A078 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cep290Q6A078 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.77■□□□□ 0.44
Cep290Q6A078 Gm11336-201ENSMUST00000118168 334 ntBASIC17.77■□□□□ 0.43
Cep290Q6A078 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Cep290Q6A078 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cep290Q6A078 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cep290Q6A078 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cep290Q6A078 Gm14057-201ENSMUST00000120631 482 ntBASIC17.76■□□□□ 0.43
Cep290Q6A078 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms