Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm7791-201ENSMUST00000219066 539 ntBASIC17.11■□□□□ 0.33
Irf4Q64287 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf4Q64287 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf4Q64287 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Irf4Q64287 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf4Q64287 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf4Q64287 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Irf4Q64287 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf4Q64287 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Gm18959-201ENSMUST00000208954 655 ntBASIC17.1■□□□□ 0.33
Irf4Q64287 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Irf4Q64287 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf4Q64287 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf4Q64287 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Irf4Q64287 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.09■□□□□ 0.33
Irf4Q64287 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.09■□□□□ 0.33
Irf4Q64287 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.09■□□□□ 0.33
Irf4Q64287 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Irf4Q64287 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Irf4Q64287 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf4Q64287 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Irf4Q64287 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Irf4Q64287 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Irf4Q64287 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Irf4Q64287 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Irf4Q64287 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.08■□□□□ 0.32
Irf4Q64287 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.08■□□□□ 0.32
Irf4Q64287 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Irf4Q64287 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Irf4Q64287 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Irf4Q64287 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.07■□□□□ 0.32
Irf4Q64287 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Gm2274-201ENSMUST00000184539 609 ntBASIC17.07■□□□□ 0.32
Irf4Q64287 Gm37025-201ENSMUST00000195159 829 ntBASIC17.07■□□□□ 0.32
Irf4Q64287 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.07■□□□□ 0.32
Irf4Q64287 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Irf4Q64287 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Irf4Q64287 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.06■□□□□ 0.32
Irf4Q64287 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Irf4Q64287 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.06■□□□□ 0.32
Irf4Q64287 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Irf4Q64287 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Gm9731-201ENSMUST00000209480 747 ntBASIC17.06■□□□□ 0.32
Irf4Q64287 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.06■□□□□ 0.32
Irf4Q64287 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms