Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SpenQ62504 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
SpenQ62504 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SpenQ62504 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SpenQ62504 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
SpenQ62504 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SpenQ62504 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.48■□□□□ 0.07
SpenQ62504 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Gm11355-201ENSMUST00000121120 306 ntBASIC15.48■□□□□ 0.07
SpenQ62504 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SpenQ62504 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SpenQ62504 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.47■□□□□ 0.07
SpenQ62504 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SpenQ62504 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SpenQ62504 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SpenQ62504 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SpenQ62504 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.47■□□□□ 0.07
SpenQ62504 Gm44357-201ENSMUST00000195897 142 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm19658-201ENSMUST00000196231 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44367-201ENSMUST00000196836 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44350-201ENSMUST00000197197 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44390-201ENSMUST00000197533 144 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44313-201ENSMUST00000198018 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44486-201ENSMUST00000198508 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44454-201ENSMUST00000198541 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44314-201ENSMUST00000199263 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44394-201ENSMUST00000199558 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44484-201ENSMUST00000199873 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44466-201ENSMUST00000200264 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Gm44359-201ENSMUST00000200671 138 ntBASIC15.47■□□□□ 0.07
SpenQ62504 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SpenQ62504 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.46■□□□□ 0.07
SpenQ62504 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.46■□□□□ 0.07
SpenQ62504 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.46■□□□□ 0.07
SpenQ62504 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SpenQ62504 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SpenQ62504 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.46■□□□□ 0.06
SpenQ62504 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.46■□□□□ 0.06
SpenQ62504 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SpenQ62504 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.45■□□□□ 0.06
SpenQ62504 Gm9731-201ENSMUST00000209480 747 ntBASIC15.45■□□□□ 0.06
SpenQ62504 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
SpenQ62504 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SpenQ62504 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.45■□□□□ 0.06
SpenQ62504 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.45■□□□□ 0.06
SpenQ62504 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SpenQ62504 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SpenQ62504 Gm4995-201ENSMUST00000117247 432 ntBASIC15.44■□□□□ 0.06
SpenQ62504 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.44■□□□□ 0.06
SpenQ62504 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms