Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Six2Q62232 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Six2Q62232 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Six2Q62232 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.55■□□□□ 0.56
Six2Q62232 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.55■□□□□ 0.56
Six2Q62232 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.55■□□□□ 0.56
Six2Q62232 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six2Q62232 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.54■□□□□ 0.56
Six2Q62232 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.54■□□□□ 0.56
Six2Q62232 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.54■□□□□ 0.56
Six2Q62232 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Six2Q62232 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Six2Q62232 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six2Q62232 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.53■□□□□ 0.56
Six2Q62232 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Six2Q62232 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Six2Q62232 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Six2Q62232 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Six2Q62232 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Gm15378-201ENSMUST00000121894 207 ntBASIC18.53■□□□□ 0.56
Six2Q62232 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Gm24841-201ENSMUST00000158676 357 ntBASIC18.53■□□□□ 0.56
Six2Q62232 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Six2Q62232 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six2Q62232 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.52■□□□□ 0.56
Six2Q62232 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Six2Q62232 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Six2Q62232 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.52■□□□□ 0.56
Six2Q62232 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Six2Q62232 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Six2Q62232 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six2Q62232 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.52■□□□□ 0.55
Six2Q62232 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Six2Q62232 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six2Q62232 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six2Q62232 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six2Q62232 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six2Q62232 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Six2Q62232 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six2Q62232 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six2Q62232 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.51■□□□□ 0.55
Six2Q62232 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.51■□□□□ 0.55
Six2Q62232 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.51■□□□□ 0.55
Six2Q62232 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six2Q62232 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six2Q62232 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms