Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Gm7889-201ENSMUST00000185591 958 ntBASIC20.53■□□□□ 0.88
Ctr9Q62018 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ctr9Q62018 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ctr9Q62018 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.52■□□□□ 0.88
Ctr9Q62018 Gm10231-201ENSMUST00000181584 441 ntBASIC20.52■□□□□ 0.88
Ctr9Q62018 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Ctr9Q62018 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Gm10175-202ENSMUST00000208752 441 ntBASIC20.52■□□□□ 0.88
Ctr9Q62018 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ctr9Q62018 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Ctr9Q62018 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctr9Q62018 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.52■□□□□ 0.87
Ctr9Q62018 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ctr9Q62018 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.51■□□□□ 0.87
Ctr9Q62018 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.51■□□□□ 0.87
Ctr9Q62018 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.51■□□□□ 0.87
Ctr9Q62018 Gm7638-201ENSMUST00000121348 967 ntBASIC20.51■□□□□ 0.87
Ctr9Q62018 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.51■□□□□ 0.87
Ctr9Q62018 Gm27463-201ENSMUST00000183569 57 ntBASIC20.51■□□□□ 0.87
Ctr9Q62018 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctr9Q62018 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ctr9Q62018 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ctr9Q62018 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Ctr9Q62018 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ctr9Q62018 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.5■□□□□ 0.87
Ctr9Q62018 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.5■□□□□ 0.87
Ctr9Q62018 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.5■□□□□ 0.87
Ctr9Q62018 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctr9Q62018 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Ctr9Q62018 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ctr9Q62018 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctr9Q62018 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ctr9Q62018 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.48■□□□□ 0.87
Ctr9Q62018 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.48■□□□□ 0.87
Ctr9Q62018 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.48■□□□□ 0.87
Ctr9Q62018 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctr9Q62018 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ctr9Q62018 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.47■□□□□ 0.87
Ctr9Q62018 Gm7977-201ENSMUST00000193787 748 ntBASIC20.47■□□□□ 0.87
Ctr9Q62018 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms