Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Runx1t1Q61909 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.66■□□□□ 0.26
Runx1t1Q61909 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Runx1t1Q61909 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Gm2399-201ENSMUST00000104944 225 ntBASIC16.65■□□□□ 0.26
Runx1t1Q61909 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Gm5408-201ENSMUST00000197998 747 ntBASIC16.65■□□□□ 0.26
Runx1t1Q61909 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Runx1t1Q61909 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Runx1t1Q61909 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.64■□□□□ 0.25
Runx1t1Q61909 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Runx1t1Q61909 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.64■□□□□ 0.25
Runx1t1Q61909 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.64■□□□□ 0.25
Runx1t1Q61909 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Runx1t1Q61909 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.63■□□□□ 0.25
Runx1t1Q61909 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.63■□□□□ 0.25
Runx1t1Q61909 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.62■□□□□ 0.25
Runx1t1Q61909 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Runx1t1Q61909 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms