Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Foxc1Q61572 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Foxc1Q61572 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Gm21156-201ENSMUST00000189693 869 ntBASIC12.78□□□□□ -0.36
Foxc1Q61572 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.78□□□□□ -0.36
Foxc1Q61572 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.78□□□□□ -0.36
Foxc1Q61572 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Foxc1Q61572 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxc1Q61572 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.77□□□□□ -0.36
Foxc1Q61572 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxc1Q61572 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxc1Q61572 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Foxc1Q61572 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.77□□□□□ -0.37
Foxc1Q61572 Gm10138-203ENSMUST00000206952 366 ntBASIC12.77□□□□□ -0.37
Foxc1Q61572 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.77□□□□□ -0.37
Foxc1Q61572 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Foxc1Q61572 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxc1Q61572 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.76□□□□□ -0.37
Foxc1Q61572 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.76□□□□□ -0.37
Foxc1Q61572 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.76□□□□□ -0.37
Foxc1Q61572 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Foxc1Q61572 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxc1Q61572 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms