Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ecm1Q61508 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ecm1Q61508 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ecm1Q61508 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ecm1Q61508 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Ecm1Q61508 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.33■□□□□ 0.68
Ecm1Q61508 Gm7461-201ENSMUST00000058918 827 ntBASIC19.33■□□□□ 0.68
Ecm1Q61508 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ecm1Q61508 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ecm1Q61508 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ecm1Q61508 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ecm1Q61508 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ecm1Q61508 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ecm1Q61508 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ecm1Q61508 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ecm1Q61508 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Gm45328-201ENSMUST00000210942 917 ntBASIC19.32■□□□□ 0.68
Ecm1Q61508 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.32■□□□□ 0.68
Ecm1Q61508 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ecm1Q61508 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ecm1Q61508 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ecm1Q61508 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ecm1Q61508 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ecm1Q61508 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ecm1Q61508 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.3■□□□□ 0.68
Ecm1Q61508 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.3■□□□□ 0.68
Ecm1Q61508 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.3■□□□□ 0.68
Ecm1Q61508 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.3■□□□□ 0.68
Ecm1Q61508 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.3■□□□□ 0.68
Ecm1Q61508 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ecm1Q61508 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ecm1Q61508 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Ecm1Q61508 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ecm1Q61508 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ecm1Q61508 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.28■□□□□ 0.68
Ecm1Q61508 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.28■□□□□ 0.68
Ecm1Q61508 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ecm1Q61508 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.28■□□□□ 0.68
Ecm1Q61508 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ecm1Q61508 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ecm1Q61508 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ecm1Q61508 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms