Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.18■□□□□ 0.5
Smarcd1Q61466 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.18■□□□□ 0.5
Smarcd1Q61466 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Gm13836-201ENSMUST00000121159 501 ntBASIC18.17■□□□□ 0.5
Smarcd1Q61466 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd1Q61466 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.17■□□□□ 0.5
Smarcd1Q61466 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Gm7889-201ENSMUST00000185591 958 ntBASIC18.16■□□□□ 0.5
Smarcd1Q61466 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Gm9731-201ENSMUST00000209480 747 ntBASIC18.16■□□□□ 0.5
Smarcd1Q61466 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.16■□□□□ 0.5
Smarcd1Q61466 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd1Q61466 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.15■□□□□ 0.5
Smarcd1Q61466 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.15■□□□□ 0.5
Smarcd1Q61466 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smarcd1Q61466 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.15■□□□□ 0.5
Smarcd1Q61466 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Gm9987-201ENSMUST00000069768 567 ntBASIC18.15■□□□□ 0.5
Smarcd1Q61466 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd1Q61466 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcd1Q61466 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcd1Q61466 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcd1Q61466 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.14■□□□□ 0.49
Smarcd1Q61466 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcd1Q61466 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Gm17661-201ENSMUST00000170317 270 ntBASIC18.13■□□□□ 0.49
Smarcd1Q61466 Gm7791-201ENSMUST00000219066 539 ntBASIC18.13■□□□□ 0.49
Smarcd1Q61466 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd1Q61466 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms