Protein–RNA interactions for Protein: Q5YIR8

Clec4a4, C-type lectin domain family 4, member a4, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clec4a4Q5YIR8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clec4a4Q5YIR8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Clec4a4Q5YIR8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Clec4a4Q5YIR8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Gm10517-202ENSMUST00000192970 758 ntBASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clec4a4Q5YIR8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.13■□□□□ 0.33
Clec4a4Q5YIR8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms