Protein–RNA interactions for Protein: Q5U462

Cdcp1, CUB domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdcp1Q5U462 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 AA414768-201ENSMUST00000121924 1257 ntBASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdcp1Q5U462 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Gm6345-202ENSMUST00000180900 204 ntBASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Il3ra-202ENSMUST00000223589 738 ntBASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Gm7367-201ENSMUST00000057611 492 ntBASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cdcp1Q5U462 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Gm10819-201ENSMUST00000099988 561 ntBASIC20.58■□□□□ 0.89
Cdcp1Q5U462 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cdcp1Q5U462 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdcp1Q5U462 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Gm13474-201ENSMUST00000122466 815 ntBASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Mir8112-201ENSMUST00000184382 131 ntBASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdcp1Q5U462 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdcp1Q5U462 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdcp1Q5U462 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.54■□□□□ 0.88
Cdcp1Q5U462 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdcp1Q5U462 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Cdcp1Q5U462 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdcp1Q5U462 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms