Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shroom1Q5SX79 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shroom1Q5SX79 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Shroom1Q5SX79 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Shroom1Q5SX79 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
Shroom1Q5SX79 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom1Q5SX79 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Gm10013-201ENSMUST00000106074 672 ntBASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Gm2274-201ENSMUST00000184539 609 ntBASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom1Q5SX79 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom1Q5SX79 Tgds-204ENSMUST00000228543 1594 ntBASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom1Q5SX79 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom1Q5SX79 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Mir5130-201ENSMUST00000175160 84 ntBASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Shroom1Q5SX79 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms