Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Gm27405-201ENSMUST00000184201 112 ntBASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-3Q5R1E6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6-3Q5R1E6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Gm12933-201ENSMUST00000120203 872 ntBASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Gm10138-203ENSMUST00000206952 366 ntBASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-3Q5R1E6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Gm4968-201ENSMUST00000071458 858 ntBASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms