Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdv4Q5R1A3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trdv4Q5R1A3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Gm11643-201ENSMUST00000119578 864 ntBASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Trmt13-210ENSMUST00000198454 880 ntBASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdv4Q5R1A3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Gm13401-201ENSMUST00000117074 291 ntBASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trdv4Q5R1A3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv4Q5R1A3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Gm18666-201ENSMUST00000190039 958 ntBASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms