Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Gm21559-201ENSMUST00000220638 855 ntBASIC30.22■■■□□ 2.43
Trim41Q5NCC3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Gm8587-201ENSMUST00000076538 843 ntBASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Idnk-204ENSMUST00000226010 1898 ntBASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim41Q5NCC3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Gm5587-201ENSMUST00000206270 674 ntBASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Trim41Q5NCC3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Gm13884-201ENSMUST00000118103 829 ntBASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Trim41Q5NCC3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC30.2■■■□□ 2.42
Trim41Q5NCC3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim41Q5NCC3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim41Q5NCC3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Trim41Q5NCC3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
Trim41Q5NCC3 Gm27389-201ENSMUST00000183622 195 ntBASIC30.17■■■□□ 2.42
Trim41Q5NCC3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC30.17■■■□□ 2.42
Trim41Q5NCC3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC30.17■■■□□ 2.42
Trim41Q5NCC3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Gm11594-201ENSMUST00000122313 162 ntBASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Gm18733-201ENSMUST00000173950 856 ntBASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Gm17808-201ENSMUST00000200859 894 ntBASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trim41Q5NCC3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim41Q5NCC3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Mir8112-201ENSMUST00000184382 131 ntBASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Gm45141-201ENSMUST00000206502 1888 ntBASIC30.14■■■□□ 2.42
Trim41Q5NCC3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms