Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clhc1Q5M6W3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clhc1Q5M6W3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clhc1Q5M6W3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.8■□□□□ 0.28
Clhc1Q5M6W3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.79■□□□□ 0.28
Clhc1Q5M6W3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clhc1Q5M6W3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms