Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps41Q5KU39 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.2■□□□□ 0.5
Vps41Q5KU39 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps41Q5KU39 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Gm42642-201ENSMUST00000200683 355 ntBASIC18.19■□□□□ 0.5
Vps41Q5KU39 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps41Q5KU39 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.18■□□□□ 0.5
Vps41Q5KU39 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps41Q5KU39 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps41Q5KU39 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps41Q5KU39 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.15■□□□□ 0.5
Vps41Q5KU39 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Vps41Q5KU39 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps41Q5KU39 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vps41Q5KU39 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps41Q5KU39 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms