Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Gm14822-201ENSMUST00000122247 291 ntBASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Mir5131-201ENSMUST00000175426 93 ntBASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps13aQ5H8C4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Gm2756-201ENSMUST00000195851 400 ntBASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Vps13aQ5H8C4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm14057-201ENSMUST00000120631 482 ntBASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Gm9731-201ENSMUST00000209480 747 ntBASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps13aQ5H8C4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Gm25911-201ENSMUST00000157621 56 ntBASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps13aQ5H8C4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Gm11779-201ENSMUST00000118541 368 ntBASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps13aQ5H8C4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms