Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp13Q5BKP2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp13Q5BKP2 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp13Q5BKP2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Usp13Q5BKP2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Gm9987-201ENSMUST00000069768 567 ntBASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp13Q5BKP2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Mir8112-201ENSMUST00000184382 131 ntBASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp13Q5BKP2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Flg-201ENSMUST00000050758 1488 ntBASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp13Q5BKP2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms