Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pfdn4Q3UWL8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pfdn4Q3UWL8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Gm18284-201ENSMUST00000172604 624 ntBASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pfdn4Q3UWL8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pfdn4Q3UWL8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.03■□□□□ 0.32
Pfdn4Q3UWL8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn4Q3UWL8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pfdn4Q3UWL8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms