Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Gm7977-201ENSMUST00000193787 748 ntBASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.56■□□□□ 0.4
Shcbp1lQ3TTP0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Gm12085-201ENSMUST00000119263 940 ntBASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shcbp1lQ3TTP0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shcbp1lQ3TTP0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm11539-201ENSMUST00000119837 557 ntBASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm13436-201ENSMUST00000120418 567 ntBASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm13559-201ENSMUST00000120476 863 ntBASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm27463-201ENSMUST00000183569 57 ntBASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Shcbp1lQ3TTP0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.52■□□□□ 0.4
Shcbp1lQ3TTP0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms