Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3KNL4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q3KNL4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3KNL4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Q3KNL4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Q3KNL4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Q3KNL4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.14■□□□□ 0.33
Q3KNL4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Flg-201ENSMUST00000050758 1488 ntBASIC17.14■□□□□ 0.33
Q3KNL4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.14■□□□□ 0.33
Q3KNL4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q3KNL4 Mir5133-201ENSMUST00000174955 77 ntBASIC17.14■□□□□ 0.33
Q3KNL4 Gm44549-201ENSMUST00000208351 577 ntBASIC17.14■□□□□ 0.33
Q3KNL4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.14■□□□□ 0.33
Q3KNL4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Q3KNL4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3KNL4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.13■□□□□ 0.33
Q3KNL4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Q3KNL4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.13■□□□□ 0.33
Q3KNL4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Q3KNL4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Q3KNL4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
Q3KNL4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.13■□□□□ 0.33
Q3KNL4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Q3KNL4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3KNL4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.12■□□□□ 0.33
Q3KNL4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.12■□□□□ 0.33
Q3KNL4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Q3KNL4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q3KNL4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.12■□□□□ 0.33
Q3KNL4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3KNL4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.12■□□□□ 0.33
Q3KNL4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.11■□□□□ 0.33
Q3KNL4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.11■□□□□ 0.33
Q3KNL4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Q3KNL4 Zfp783-201ENSMUST00000095946 670 ntBASIC17.11■□□□□ 0.33
Q3KNL4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Q3KNL4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.11■□□□□ 0.33
Q3KNL4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3KNL4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Q3KNL4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.1■□□□□ 0.33
Q3KNL4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Q3KNL4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q3KNL4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.1■□□□□ 0.33
Q3KNL4 Gm27405-201ENSMUST00000184201 112 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms