Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nhej1Q3KNJ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nhej1Q3KNJ2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nhej1Q3KNJ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nhej1Q3KNJ2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nhej1Q3KNJ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nhej1Q3KNJ2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nhej1Q3KNJ2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhej1Q3KNJ2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhej1Q3KNJ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms