Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Gm5864-201ENSMUST00000202263 970 ntBASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Chrna5Q2MKA5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna5Q2MKA5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 AW822252-206ENSMUST00000208904 237 ntBASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna5Q2MKA5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Idnk-204ENSMUST00000226010 1898 ntBASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna5Q2MKA5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Gm5867-201ENSMUST00000063197 592 ntBASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna5Q2MKA5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.7■□□□□ 0.91
Chrna5Q2MKA5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm13884-201ENSMUST00000118103 829 ntBASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm27459-201ENSMUST00000184860 107 ntBASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm28659-201ENSMUST00000188013 759 ntBASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm43514-201ENSMUST00000198852 424 ntBASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna5Q2MKA5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Gm6443-201ENSMUST00000203599 874 ntBASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna5Q2MKA5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms