Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Gm7230-201ENSMUST00000173026 815 ntBASIC15.65■□□□□ 0.1
Chd8Q09XV5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.65■□□□□ 0.1
Chd8Q09XV5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Gm15173-201ENSMUST00000122049 433 ntBASIC15.64■□□□□ 0.09
Chd8Q09XV5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd8Q09XV5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.63■□□□□ 0.09
Chd8Q09XV5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Gm24841-201ENSMUST00000158676 357 ntBASIC15.63■□□□□ 0.09
Chd8Q09XV5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.63■□□□□ 0.09
Chd8Q09XV5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chd8Q09XV5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Gm11780-201ENSMUST00000136880 516 ntBASIC15.62■□□□□ 0.09
Chd8Q09XV5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chd8Q09XV5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chd8Q09XV5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.61■□□□□ 0.09
Chd8Q09XV5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd8Q09XV5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.6■□□□□ 0.09
Chd8Q09XV5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd8Q09XV5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.6■□□□□ 0.09
Chd8Q09XV5 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.6■□□□□ 0.09
Chd8Q09XV5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms