Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sox4Q06831 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.13■□□□□ 0.33
Sox4Q06831 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox4Q06831 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sox4Q06831 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox4Q06831 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox4Q06831 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox4Q06831 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox4Q06831 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sox4Q06831 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox4Q06831 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox4Q06831 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.12■□□□□ 0.33
Sox4Q06831 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox4Q06831 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sox4Q06831 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.12■□□□□ 0.33
Sox4Q06831 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Sox4Q06831 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.12■□□□□ 0.33
Sox4Q06831 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox4Q06831 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox4Q06831 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox4Q06831 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Gm38027-201ENSMUST00000192315 235 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.11■□□□□ 0.33
Sox4Q06831 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox4Q06831 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox4Q06831 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox4Q06831 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox4Q06831 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.11■□□□□ 0.33
Sox4Q06831 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sox4Q06831 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Sox4Q06831 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox4Q06831 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.1■□□□□ 0.33
Sox4Q06831 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox4Q06831 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Sox4Q06831 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox4Q06831 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox4Q06831 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.08■□□□□ 0.33
Sox4Q06831 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.08■□□□□ 0.33
Sox4Q06831 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sox4Q06831 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox4Q06831 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.08■□□□□ 0.32
Sox4Q06831 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.08■□□□□ 0.32
Sox4Q06831 Gm30025-201ENSMUST00000218555 728 ntBASIC17.08■□□□□ 0.32
Sox4Q06831 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sox4Q06831 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Rarb-207ENSMUST00000225921 2756 ntBASIC17.08■□□□□ 0.32
Sox4Q06831 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sox4Q06831 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox4Q06831 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms