Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Col9a1Q05722 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col9a1Q05722 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Gm20949-201ENSMUST00000206478 952 ntBASIC17.09■□□□□ 0.33
Col9a1Q05722 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.09■□□□□ 0.33
Col9a1Q05722 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.09■□□□□ 0.33
Col9a1Q05722 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.09■□□□□ 0.33
Col9a1Q05722 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col9a1Q05722 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col9a1Q05722 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col9a1Q05722 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col9a1Q05722 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col9a1Q05722 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col9a1Q05722 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.08■□□□□ 0.32
Col9a1Q05722 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Mir2861-201ENSMUST00000175539 82 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44357-201ENSMUST00000195897 142 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm19658-201ENSMUST00000196231 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44367-201ENSMUST00000196836 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44350-201ENSMUST00000197197 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44390-201ENSMUST00000197533 144 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44313-201ENSMUST00000198018 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44486-201ENSMUST00000198508 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44454-201ENSMUST00000198541 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44314-201ENSMUST00000199263 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44394-201ENSMUST00000199558 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44484-201ENSMUST00000199873 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44466-201ENSMUST00000200264 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm44359-201ENSMUST00000200671 138 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.08■□□□□ 0.32
Col9a1Q05722 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col9a1Q05722 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Col9a1Q05722 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Gm28196-201ENSMUST00000187719 640 ntBASIC17.07■□□□□ 0.32
Col9a1Q05722 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.07■□□□□ 0.32
Col9a1Q05722 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.07■□□□□ 0.32
Col9a1Q05722 Gm6089-201ENSMUST00000197666 938 ntBASIC17.07■□□□□ 0.32
Col9a1Q05722 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Col9a1Q05722 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col9a1Q05722 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.06■□□□□ 0.32
Col9a1Q05722 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm13401-201ENSMUST00000117074 291 ntBASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm14140-201ENSMUST00000119999 995 ntBASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.06■□□□□ 0.32
Col9a1Q05722 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.06■□□□□ 0.32
Col9a1Q05722 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col9a1Q05722 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col9a1Q05722 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Col9a1Q05722 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col9a1Q05722 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col9a1Q05722 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col9a1Q05722 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col9a1Q05722 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col9a1Q05722 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col9a1Q05722 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col9a1Q05722 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms