Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.77■■□□□ 1.08
Smarcc1P97496 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.77■■□□□ 1.08
Smarcc1P97496 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.76■■□□□ 1.07
Smarcc1P97496 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Gm28659-201ENSMUST00000188013 759 ntBASIC21.76■■□□□ 1.07
Smarcc1P97496 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.76■■□□□ 1.07
Smarcc1P97496 Gm43514-201ENSMUST00000198852 424 ntBASIC21.76■■□□□ 1.07
Smarcc1P97496 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.76■■□□□ 1.07
Smarcc1P97496 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Birc2-201ENSMUST00000054878 378 ntBASIC21.76■■□□□ 1.07
Smarcc1P97496 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarcc1P97496 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc1P97496 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Smarcc1P97496 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.75■■□□□ 1.07
Smarcc1P97496 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.75■■□□□ 1.07
Smarcc1P97496 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.75■■□□□ 1.07
Smarcc1P97496 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc1P97496 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc1P97496 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc1P97496 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc1P97496 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarcc1P97496 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarcc1P97496 Gm6443-201ENSMUST00000203599 874 ntBASIC21.74■■□□□ 1.07
Smarcc1P97496 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.74■■□□□ 1.07
Smarcc1P97496 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.74■■□□□ 1.07
Smarcc1P97496 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc1P97496 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc1P97496 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.73■■□□□ 1.07
Smarcc1P97496 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Smarcc1P97496 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.73■■□□□ 1.07
Smarcc1P97496 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc1P97496 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smarcc1P97496 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.73■■□□□ 1.07
Smarcc1P97496 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smarcc1P97496 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc1P97496 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.71■■□□□ 1.07
Smarcc1P97496 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc1P97496 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarcc1P97496 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarcc1P97496 Gm5864-201ENSMUST00000202263 970 ntBASIC21.71■■□□□ 1.07
Smarcc1P97496 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.71■■□□□ 1.07
Smarcc1P97496 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.71■■□□□ 1.07
Smarcc1P97496 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc1P97496 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Smarcc1P97496 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc1P97496 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Smarcc1P97496 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcc1P97496 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms