Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.95■□□□□ 0.62
Lig3P97386 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Lig3P97386 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
Lig3P97386 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.94■□□□□ 0.62
Lig3P97386 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lig3P97386 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lig3P97386 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.93■□□□□ 0.62
Lig3P97386 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.93■□□□□ 0.62
Lig3P97386 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lig3P97386 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
Lig3P97386 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Lig3P97386 Odf3b-204ENSMUST00000227834 930 ntBASIC18.93■□□□□ 0.62
Lig3P97386 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Lig3P97386 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lig3P97386 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Lig3P97386 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.92■□□□□ 0.62
Lig3P97386 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.92■□□□□ 0.62
Lig3P97386 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.92■□□□□ 0.62
Lig3P97386 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lig3P97386 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.92■□□□□ 0.62
Lig3P97386 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lig3P97386 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.91■□□□□ 0.62
Lig3P97386 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Lig3P97386 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.91■□□□□ 0.62
Lig3P97386 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lig3P97386 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.9■□□□□ 0.62
Lig3P97386 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Lig3P97386 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Gm23634-201ENSMUST00000175071 91 ntBASIC18.9■□□□□ 0.62
Lig3P97386 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.9■□□□□ 0.62
Lig3P97386 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lig3P97386 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lig3P97386 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lig3P97386 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms