Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43bP86448 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.93■□□□□ 0.46
Trim43bP86448 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim43bP86448 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim43bP86448 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43bP86448 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Idnk-204ENSMUST00000226010 1898 ntBASIC17.92■□□□□ 0.46
Trim43bP86448 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim43bP86448 Gm10653-202ENSMUST00000139570 835 ntBASIC17.92■□□□□ 0.46
Trim43bP86448 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim43bP86448 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.92■□□□□ 0.46
Trim43bP86448 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43bP86448 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim43bP86448 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim43bP86448 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim43bP86448 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.91■□□□□ 0.46
Trim43bP86448 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim43bP86448 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim43bP86448 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43bP86448 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim43bP86448 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim43bP86448 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.9■□□□□ 0.46
Trim43bP86448 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43bP86448 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim43bP86448 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim43bP86448 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim43bP86448 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.89■□□□□ 0.45
Trim43bP86448 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim43bP86448 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Gm22240-201ENSMUST00000175225 82 ntBASIC17.89■□□□□ 0.45
Trim43bP86448 Gm2559-201ENSMUST00000201323 363 ntBASIC17.89■□□□□ 0.45
Trim43bP86448 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43bP86448 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim43bP86448 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim43bP86448 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim43bP86448 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Gm44549-201ENSMUST00000208351 577 ntBASIC17.88■□□□□ 0.45
Trim43bP86448 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim43bP86448 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim43bP86448 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.88■□□□□ 0.45
Trim43bP86448 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43bP86448 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Trim43bP86448 Haglr-201ENSMUST00000100000 2085 ntBASIC17.87■□□□□ 0.45
Trim43bP86448 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim43bP86448 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim43bP86448 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim43bP86448 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim43bP86448 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43bP86448 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms