Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl21aP84444 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl21aP84444 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl21aP84444 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl21aP84444 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.52□□□□□ -0.08
Ccl21aP84444 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Ccl21aP84444 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl21aP84444 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl21aP84444 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl21aP84444 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl21aP84444 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.52□□□□□ -0.09
Ccl21aP84444 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccl21aP84444 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl21aP84444 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl21aP84444 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ccl21aP84444 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccl21aP84444 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ccl21aP84444 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccl21aP84444 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl21aP84444 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl21aP84444 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl21aP84444 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl21aP84444 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.5□□□□□ -0.09
Ccl21aP84444 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl21aP84444 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl21aP84444 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl21aP84444 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ccl21aP84444 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ccl21aP84444 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccl21aP84444 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.48□□□□□ -0.09
Ccl21aP84444 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.48□□□□□ -0.09
Ccl21aP84444 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccl21aP84444 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.48□□□□□ -0.09
Ccl21aP84444 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.48□□□□□ -0.09
Ccl21aP84444 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ccl21aP84444 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl21aP84444 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms