Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SgcbP82349 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SgcbP82349 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.54■□□□□ 0.08
SgcbP82349 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SgcbP82349 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.54■□□□□ 0.08
SgcbP82349 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Gm13401-201ENSMUST00000117074 291 ntBASIC15.54■□□□□ 0.08
SgcbP82349 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.54■□□□□ 0.08
SgcbP82349 Mir6982-201ENSMUST00000184354 68 ntBASIC15.54■□□□□ 0.08
SgcbP82349 Gm4974-201ENSMUST00000209974 875 ntBASIC15.54■□□□□ 0.08
SgcbP82349 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.54■□□□□ 0.08
SgcbP82349 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SgcbP82349 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.54■□□□□ 0.08
SgcbP82349 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SgcbP82349 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SgcbP82349 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SgcbP82349 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.53■□□□□ 0.08
SgcbP82349 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SgcbP82349 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.53■□□□□ 0.08
SgcbP82349 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.53■□□□□ 0.08
SgcbP82349 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SgcbP82349 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SgcbP82349 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SgcbP82349 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.52■□□□□ 0.08
SgcbP82349 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.52■□□□□ 0.08
SgcbP82349 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
SgcbP82349 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.52■□□□□ 0.08
SgcbP82349 Timm23-208ENSMUST00000226683 750 ntBASIC15.52■□□□□ 0.08
SgcbP82349 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SgcbP82349 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.52■□□□□ 0.08
SgcbP82349 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SgcbP82349 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SgcbP82349 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SgcbP82349 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SgcbP82349 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SgcbP82349 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SgcbP82349 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SgcbP82349 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SgcbP82349 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.51■□□□□ 0.07
SgcbP82349 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 Idnk-204ENSMUST00000226010 1898 ntBASIC15.51■□□□□ 0.07
SgcbP82349 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.51■□□□□ 0.07
SgcbP82349 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.51■□□□□ 0.07
SgcbP82349 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SgcbP82349 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.51■□□□□ 0.07
SgcbP82349 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms