Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.91■□□□□ 0.62
Irf3P70671 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.91■□□□□ 0.62
Irf3P70671 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Gm23634-201ENSMUST00000175071 91 ntBASIC18.91■□□□□ 0.62
Irf3P70671 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.91■□□□□ 0.62
Irf3P70671 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Irf3P70671 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Irf3P70671 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Irf3P70671 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
Irf3P70671 Grk6-206ENSMUST00000224995 2971 ntBASIC18.9■□□□□ 0.62
Irf3P70671 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Irf3P70671 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Irf3P70671 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Irf3P70671 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Irf3P70671 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.9■□□□□ 0.62
Irf3P70671 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.9■□□□□ 0.62
Irf3P70671 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Irf3P70671 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Irf3P70671 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf3P70671 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf3P70671 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Irf3P70671 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.89■□□□□ 0.61
Irf3P70671 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Irf3P70671 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.89■□□□□ 0.61
Irf3P70671 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.89■□□□□ 0.61
Irf3P70671 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Irf3P70671 Gm7213-201ENSMUST00000215977 950 ntBASIC18.89■□□□□ 0.61
Irf3P70671 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf3P70671 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.88■□□□□ 0.61
Irf3P70671 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.88■□□□□ 0.61
Irf3P70671 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.88■□□□□ 0.61
Irf3P70671 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Irf3P70671 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Irf3P70671 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.88■□□□□ 0.61
Irf3P70671 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf3P70671 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Irf3P70671 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Irf3P70671 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf3P70671 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Irf3P70671 Gm27389-201ENSMUST00000183622 195 ntBASIC18.87■□□□□ 0.61
Irf3P70671 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf3P70671 Gm21559-201ENSMUST00000220638 855 ntBASIC18.87■□□□□ 0.61
Irf3P70671 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.87■□□□□ 0.61
Irf3P70671 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.87■□□□□ 0.61
Irf3P70671 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Gm8587-201ENSMUST00000076538 843 ntBASIC18.87■□□□□ 0.61
Irf3P70671 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Irf3P70671 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf3P70671 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf3P70671 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Irf3P70671 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf3P70671 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf3P70671 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf3P70671 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Irf3P70671 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf3P70671 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms