Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Shox2P70390 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.28■□□□□ 0.36
Shox2P70390 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Shox2P70390 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Shox2P70390 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.28■□□□□ 0.36
Shox2P70390 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shox2P70390 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.27■□□□□ 0.36
Shox2P70390 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.27■□□□□ 0.36
Shox2P70390 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Shox2P70390 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Shox2P70390 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shox2P70390 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.27■□□□□ 0.35
Shox2P70390 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Shox2P70390 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shox2P70390 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Shox2P70390 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Shox2P70390 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shox2P70390 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.27■□□□□ 0.35
Shox2P70390 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.26■□□□□ 0.35
Shox2P70390 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.26■□□□□ 0.35
Shox2P70390 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.26■□□□□ 0.35
Shox2P70390 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Shox2P70390 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
Shox2P70390 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Shox2P70390 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Shox2P70390 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shox2P70390 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Shox2P70390 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shox2P70390 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Shox2P70390 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.25■□□□□ 0.35
Shox2P70390 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Gm29791-202ENSMUST00000207888 369 ntBASIC17.25■□□□□ 0.35
Shox2P70390 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shox2P70390 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shox2P70390 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shox2P70390 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Shox2P70390 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.24■□□□□ 0.35
Shox2P70390 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.24■□□□□ 0.35
Shox2P70390 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shox2P70390 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms