Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rad50P70388 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rad50P70388 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rad50P70388 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rad50P70388 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.9■□□□□ 0.94
Rad50P70388 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.9■□□□□ 0.94
Rad50P70388 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Rad50P70388 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.9■□□□□ 0.94
Rad50P70388 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Rad50P70388 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rad50P70388 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rad50P70388 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.9■□□□□ 0.94
Rad50P70388 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rad50P70388 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rad50P70388 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rad50P70388 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Rad50P70388 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rad50P70388 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.89■□□□□ 0.93
Rad50P70388 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 Gm18025-201ENSMUST00000221733 862 ntBASIC20.89■□□□□ 0.93
Rad50P70388 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rad50P70388 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rad50P70388 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.88■□□□□ 0.93
Rad50P70388 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rad50P70388 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rad50P70388 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.87■□□□□ 0.93
Rad50P70388 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rad50P70388 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Gm43183-201ENSMUST00000200632 547 ntBASIC20.87■□□□□ 0.93
Rad50P70388 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.87■□□□□ 0.93
Rad50P70388 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rad50P70388 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Rad50P70388 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms