Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm4974-201ENSMUST00000209974 875 ntBASIC16.31■□□□□ 0.2
Six5P70178 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Six5P70178 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
Six5P70178 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Six5P70178 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six5P70178 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six5P70178 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Six5P70178 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six5P70178 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.3■□□□□ 0.2
Six5P70178 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Six5P70178 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Six5P70178 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Six5P70178 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.29■□□□□ 0.2
Six5P70178 Gm22240-201ENSMUST00000175225 82 ntBASIC16.29■□□□□ 0.2
Six5P70178 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.29■□□□□ 0.2
Six5P70178 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
Six5P70178 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.29■□□□□ 0.2
Six5P70178 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six5P70178 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Six5P70178 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Six5P70178 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.28■□□□□ 0.2
Six5P70178 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.28■□□□□ 0.2
Six5P70178 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Six5P70178 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six5P70178 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six5P70178 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.27■□□□□ 0.2
Six5P70178 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Six5P70178 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Six5P70178 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.27■□□□□ 0.2
Six5P70178 Gm10517-202ENSMUST00000192970 758 ntBASIC16.27■□□□□ 0.2
Six5P70178 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six5P70178 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Six5P70178 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Six5P70178 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six5P70178 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.26■□□□□ 0.19
Six5P70178 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.26■□□□□ 0.19
Six5P70178 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.26■□□□□ 0.19
Six5P70178 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Six5P70178 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms