Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmgb1P63158 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hmgb1P63158 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Gm13401-201ENSMUST00000117074 291 ntBASIC19.15■□□□□ 0.66
Hmgb1P63158 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Hmgb1P63158 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgb1P63158 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.14■□□□□ 0.65
Hmgb1P63158 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.14■□□□□ 0.65
Hmgb1P63158 Gm10602-201ENSMUST00000098239 609 ntBASIC19.14■□□□□ 0.65
Hmgb1P63158 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.14■□□□□ 0.65
Hmgb1P63158 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgb1P63158 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.65
Hmgb1P63158 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.14■□□□□ 0.65
Hmgb1P63158 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.13■□□□□ 0.65
Hmgb1P63158 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hmgb1P63158 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmgb1P63158 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Gm15375-201ENSMUST00000119510 849 ntBASIC19.13■□□□□ 0.65
Hmgb1P63158 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Hmgb1P63158 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmgb1P63158 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmgb1P63158 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb1P63158 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hmgb1P63158 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hmgb1P63158 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hmgb1P63158 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hmgb1P63158 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hmgb1P63158 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb1P63158 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmgb1P63158 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hmgb1P63158 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hmgb1P63158 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmgb1P63158 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.11■□□□□ 0.65
Hmgb1P63158 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hmgb1P63158 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb1P63158 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hmgb1P63158 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms