Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lhx1P63006 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.14■□□□□ 0.33
Lhx1P63006 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.14■□□□□ 0.33
Lhx1P63006 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.14■□□□□ 0.33
Lhx1P63006 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lhx1P63006 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx1P63006 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.13■□□□□ 0.33
Lhx1P63006 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lhx1P63006 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lhx1P63006 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lhx1P63006 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.13■□□□□ 0.33
Lhx1P63006 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx1P63006 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Lhx1P63006 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx1P63006 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lhx1P63006 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.12■□□□□ 0.33
Lhx1P63006 Gm9731-201ENSMUST00000209480 747 ntBASIC17.12■□□□□ 0.33
Lhx1P63006 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx1P63006 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx1P63006 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lhx1P63006 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lhx1P63006 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lhx1P63006 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.11■□□□□ 0.33
Lhx1P63006 Gm2274-201ENSMUST00000184539 609 ntBASIC17.11■□□□□ 0.33
Lhx1P63006 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lhx1P63006 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.11■□□□□ 0.33
Lhx1P63006 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.11■□□□□ 0.33
Lhx1P63006 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx1P63006 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lhx1P63006 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lhx1P63006 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.1■□□□□ 0.33
Lhx1P63006 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.1■□□□□ 0.33
Lhx1P63006 Gm7889-201ENSMUST00000185591 958 ntBASIC17.1■□□□□ 0.33
Lhx1P63006 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.1■□□□□ 0.33
Lhx1P63006 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx1P63006 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lhx1P63006 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms