Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lsm5P62322 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Lsm5P62322 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.59□□□□□ -0.07
Lsm5P62322 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.59□□□□□ -0.07
Lsm5P62322 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Lsm5P62322 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm5P62322 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm5P62322 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Lsm5P62322 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.58□□□□□ -0.08
Lsm5P62322 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lsm5P62322 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Lsm5P62322 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm5P62322 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm5P62322 Gm14117-201ENSMUST00000122417 843 ntBASIC14.57□□□□□ -0.08
Lsm5P62322 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.57□□□□□ -0.08
Lsm5P62322 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Lsm5P62322 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm5P62322 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.57□□□□□ -0.08
Lsm5P62322 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lsm5P62322 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lsm5P62322 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm5P62322 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm5P62322 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm5P62322 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.56□□□□□ -0.08
Lsm5P62322 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.56□□□□□ -0.08
Lsm5P62322 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm5P62322 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lsm5P62322 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm5P62322 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm5P62322 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm5P62322 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm5P62322 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms