Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.28■□□□□ 0.04
Lsm6P62313 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lsm6P62313 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm6P62313 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm6P62313 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.27■□□□□ 0.04
Lsm6P62313 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsm6P62313 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Gm42545-201ENSMUST00000202755 922 ntBASIC15.27■□□□□ 0.04
Lsm6P62313 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.27■□□□□ 0.04
Lsm6P62313 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsm6P62313 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsm6P62313 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm6P62313 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm6P62313 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm6P62313 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm6P62313 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.27■□□□□ 0.03
Lsm6P62313 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lsm6P62313 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm6P62313 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsm6P62313 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm6P62313 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.26■□□□□ 0.03
Lsm6P62313 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lsm6P62313 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
Lsm6P62313 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Lsm6P62313 Gm5643-201ENSMUST00000117081 966 ntBASIC15.26■□□□□ 0.03
Lsm6P62313 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsm6P62313 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.26■□□□□ 0.03
Lsm6P62313 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.26■□□□□ 0.03
Lsm6P62313 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.26■□□□□ 0.03
Lsm6P62313 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsm6P62313 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm6P62313 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.25■□□□□ 0.03
Lsm6P62313 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Gm37292-201ENSMUST00000192062 758 ntBASIC15.25■□□□□ 0.03
Lsm6P62313 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.25■□□□□ 0.03
Lsm6P62313 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm6P62313 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm6P62313 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Lsm6P62313 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.24■□□□□ 0.03
Lsm6P62313 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsm6P62313 Gm12382-201ENSMUST00000122005 922 ntBASIC15.24■□□□□ 0.03
Lsm6P62313 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.24■□□□□ 0.03
Lsm6P62313 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm6P62313 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms