Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tm6sf1P58749 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tm6sf1P58749 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tm6sf1P58749 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Gm7638-201ENSMUST00000121348 967 ntBASIC21.38■■□□□ 1.01
Tm6sf1P58749 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Tm6sf1P58749 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.37■■□□□ 1.01
Tm6sf1P58749 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf1P58749 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.36■■□□□ 1.01
Tm6sf1P58749 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf1P58749 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.35■■□□□ 1.01
Tm6sf1P58749 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf1P58749 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.34■■□□□ 1.01
Tm6sf1P58749 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Gm9731-201ENSMUST00000209480 747 ntBASIC21.34■■□□□ 1.01
Tm6sf1P58749 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf1P58749 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.33■■□□□ 1.01
Tm6sf1P58749 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf1P58749 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tm6sf1P58749 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tm6sf1P58749 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.33■■□□□ 1
Tm6sf1P58749 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tm6sf1P58749 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tm6sf1P58749 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tm6sf1P58749 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tm6sf1P58749 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Tm6sf1P58749 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tm6sf1P58749 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.32■■□□□ 1
Tm6sf1P58749 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms