Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.52■□□□□ 0.4
SmoP56726 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SmoP56726 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.52■□□□□ 0.4
SmoP56726 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SmoP56726 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SmoP56726 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SmoP56726 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SmoP56726 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SmoP56726 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SmoP56726 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SmoP56726 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SmoP56726 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.51■□□□□ 0.39
SmoP56726 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.51■□□□□ 0.39
SmoP56726 Gm9731-201ENSMUST00000209480 747 ntBASIC17.51■□□□□ 0.39
SmoP56726 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.51■□□□□ 0.39
SmoP56726 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.51■□□□□ 0.39
SmoP56726 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SmoP56726 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.51■□□□□ 0.39
SmoP56726 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.5■□□□□ 0.39
SmoP56726 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.5■□□□□ 0.39
SmoP56726 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SmoP56726 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.5■□□□□ 0.39
SmoP56726 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.5■□□□□ 0.39
SmoP56726 Gm10231-201ENSMUST00000181584 441 ntBASIC17.5■□□□□ 0.39
SmoP56726 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Gm10175-202ENSMUST00000208752 441 ntBASIC17.5■□□□□ 0.39
SmoP56726 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.5■□□□□ 0.39
SmoP56726 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SmoP56726 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.49■□□□□ 0.39
SmoP56726 Gm17661-201ENSMUST00000170317 270 ntBASIC17.49■□□□□ 0.39
SmoP56726 Il3ra-202ENSMUST00000223589 738 ntBASIC17.49■□□□□ 0.39
SmoP56726 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SmoP56726 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SmoP56726 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SmoP56726 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.48■□□□□ 0.39
SmoP56726 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.48■□□□□ 0.39
SmoP56726 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SmoP56726 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SmoP56726 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SmoP56726 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.47■□□□□ 0.39
SmoP56726 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Gm2274-201ENSMUST00000184539 609 ntBASIC17.47■□□□□ 0.39
SmoP56726 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms